{"id":301,"date":"2019-10-15T19:51:20","date_gmt":"2019-10-15T19:51:20","guid":{"rendered":"https:\/\/scienceweb.clemson.edu\/cugbf\/?p=301"},"modified":"2019-10-21T13:06:35","modified_gmt":"2019-10-21T13:06:35","slug":"hands-on-rnaseq-workshop","status":"publish","type":"post","link":"https:\/\/scienceweb.clemson.edu\/cugbf\/hands-on-rnaseq-workshop\/","title":{"rendered":"October: Hands-on RNAseq Workshop &#8211; FULL"},"content":{"rendered":"<h4><strong>When: <\/strong>Tuesday &amp; Wednesday, October 29 &amp; 30, 2019 from 9:00 AM &#8211; 12:00 PM<br \/>\n<strong>Where: <\/strong>The Jordan Room, located in between Long Hall and Jordan Hall, 130 Delta Epsilon Ct., Clemson, SC, 29634<\/h4>\n<p>As part of the Clemson University Genomics and Bioinformatics Facility&#8217;s mission to make next-generation sequencing and analysis accessible, we are pleased to offer a two-day practical workshop on RNAseq and differential gene expression (DGE) analyses. Participants will be walked through a simple RNAseq analysis pipleline including raw data processing, read mapping, DGE, and interpreting outputs. Users will be introduced to software including Fastqc, Trim-Galore, RSEM, Bowtie2, Subreads, and two R-based DGE methods. Participants are welcome to use their own data, though example datasets will be available.<\/p>\n<p>Upon successful registration and acknowledgment of the two-day workshop, individuals will be able to sign up for a two part live training workshop. Space is limited to the first 20 registrants but will be offered again later in the semester.<\/p>\n<p>Click<a href=\"https:\/\/clemson.bridgeapp.com\/learner\/programs\/f2c173e4\/enroll\"> here<\/a> for more information and to register for the event.<\/p>\n<p>&nbsp;<\/p>\n<h4><strong>This live training is <u>currently full.<\/u> Please sign up for the November live training or wait for Spring 2020 dates.<\/strong><\/h4>\n","protected":false},"excerpt":{"rendered":"<p>When: Tuesday &amp; Wednesday, October 29 &amp; 30, 2019 from 9:00 AM &#8211; 12:00 PM Where: The Jordan Room, located in between Long Hall and Jordan Hall, 130 Delta Epsilon Ct., Clemson, SC, 29634 As part of the Clemson University Genomics and Bioinformatics Facility&#8217;s mission to make next-generation sequencing and analysis accessible, we are pleased [&hellip;]<\/p>\n","protected":false},"author":10,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_et_pb_use_builder":"off","_et_pb_old_content":"","_et_gb_content_width":"","footnotes":""},"categories":[12],"tags":[],"class_list":["post-301","post","type-post","status-publish","format-standard","hentry","category-workshops"],"_links":{"self":[{"href":"https:\/\/scienceweb.clemson.edu\/cugbf\/wp-json\/wp\/v2\/posts\/301","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/scienceweb.clemson.edu\/cugbf\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/scienceweb.clemson.edu\/cugbf\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/scienceweb.clemson.edu\/cugbf\/wp-json\/wp\/v2\/users\/10"}],"replies":[{"embeddable":true,"href":"https:\/\/scienceweb.clemson.edu\/cugbf\/wp-json\/wp\/v2\/comments?post=301"}],"version-history":[{"count":0,"href":"https:\/\/scienceweb.clemson.edu\/cugbf\/wp-json\/wp\/v2\/posts\/301\/revisions"}],"wp:attachment":[{"href":"https:\/\/scienceweb.clemson.edu\/cugbf\/wp-json\/wp\/v2\/media?parent=301"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/scienceweb.clemson.edu\/cugbf\/wp-json\/wp\/v2\/categories?post=301"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/scienceweb.clemson.edu\/cugbf\/wp-json\/wp\/v2\/tags?post=301"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}